Section Ⅰ Array Platforms
1 The Affymetrix GeneChip Platform:An Overview
2 The Agilent In Situ Synthesized Microarray Platform
3 Illumina Universal Bead Arrays
4 Microarray Oligonucleotide-probes
5 Automated Liquid Handling and High-Throughput Preparation of Polymerase Chain Reaction Amplified DNA for Microarray Fabrication
6 The Printing Process:Tips on Tips
7 Making and Using Spotted DAN Microarrays in an Academic Core Laboratory
8 Printing Your Own Inkjet Microarrays
9 Peptide Nucleic Acid Microarrays Made with(S,S)-trans-Cyclopentane-Constrained Peptide Nucleic Acids
Section Ⅱ Wet-Bench Protocols
10 Optimizing Experiment and Analysis Parameters for Spotted Microarrays
11 Sample Labeling:An Overview
12 Genomic DNA as a General Cohybridization Standard for Ratiometric Microarrays
13 Analysis of Sequence Specificities of DNA-Binding Proteins with Protein Binding Microarrays
14 Microarray Analysis of RNA Processing and Modification
15 Mapping the Distribution of Chromatin Proteins by ChIP on Chip
16 DamID:Mapping of In Vivo Protein-Genome Interactions Using Tethered DNA Adenine Methyltransferase Using Tethered DNA-Adenine Methyltransferase
17 Whole-Genome Genotyping
18 Mapping Drosophila Genomic Aberration Breakpoints with Comparative Genome Hybridization on Microarrys
19 Performing Quantitative Reverse-Transcribed Polymerase Chain Reaction Experiments
20 The Application of Tissue Microarrays in the Validation of Microarray Results
21 Mapping Histone Modefications by Nucleosome Immunoprecipitation
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